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| De Jode, Aurélien; David, Romain; Haguenauer, Anne; Cahill, Abigail E.; Erga, Zinovia; Guillemain, Dorian; Sartoretto, Stephane; Rocher, Caroline; Selva, Marjorie; Le Gall, Line; Féral, Jean-pierre; Chenuil, Anne. |
| Ecosystem engineering species alter the physical structure of their environment and can create or modify habitats, having a massive impact on local biodiversity. Coralligenous reefs are highly diverse habitats endemic to the Mediterranean Sea built by calcareous benthic organisms among which Crustose Coralline Algae are the main engineering species. We analyzed the diversity of Lithophyllum stictiforme or L. cabiochiae in coralligenous habitats combining a multiple barcode and a population genomics approach with seascape features. Population genomics allowed disentangling pure spatial effects from environmental effects. We found that these taxa form a complex of eight highly divergent cryptic species that are easily identifiable using classic barcode... |
| Tipo: Text |
Palavras-chave: Engineering species; Cryptic species; Ecological niche; Coralligenous habitats; Ecological differentiation; Crustose Coralline Algae. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00487/59859/63014.pdf |
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| Weber, Alexandra Anh-thu; Stohr, Sabine; Chenuil, Anne. |
| Cryptic species are numerous in the marine environment. The brittle star Ophioderma longicauda is composed of six mitochondrial lineages, encompassing brooders, which form a monophyletic group, and broadcasters, from which the brooders are derived. To clarify the species limits within O. longicauda, we compared the reproductive status of the sympatric lineages L1 and L3 (defined after sequencing a portion of the mitochondrial gene COI) during the month of May in Greece. In addition, we genotyped a nuclear marker, intron i51. Each L3 female was brooding, whereas all L1 specimens displayed full gonads, suggesting temporal pre-zygotic isolation between brooders and broadcasters. Statistical differences were found among lineages in morphology and bathymetric... |
| Tipo: Text |
Palavras-chave: Ophiuroidea; Espèces cryptiques; Espèce incubante; Sous-unité I de la cytochrome oxydase; EPIC; Ophiuroidea; Cryptic species; Brooding species; Cytochrome oxidase subunit I; EPIC. |
| Ano: 2014 |
URL: https://archimer.ifremer.fr/doc/00372/48271/48576.pdf |
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| Feis, Marieke E.; Goedknegt, M. Anouk; Arzul, Isabelle; Chenuil, Anne; Den Boon, Onno; Gottschalck, Leo; Kondo, Yusuke; Ohtsuka, Susumu; Shama, Lisa N. S.; Thieltges, David W.; Wegner, K. Mathias; Luttikhuizen, Pieternella C.. |
| Invasive species, and especially invasive parasites, represent excellent models to study ecological and evolutionary mechanisms in the wild. To understand these processes, it is crucial to obtain more knowledge on the native range, invasion routes and invasion history of invasive parasites. We investigated the consecutive invasions of two parasitic copepods (Mytilicola intestinalis and Mytilicola orientalis) by combining an extensive literature survey covering the reported putative native regions and the present-day invaded regions with a global phylogeography of both species. The population genetic analyses based on partial COI sequences revealed significant population differentiation for M. orientalis within the native region in Japan, while introduced... |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00514/62569/66922.pdf |
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| Lecointre, Guillaume; Ameziane, Nadia; Boisselier, Marie-catherine; Bonillo, Celine; Busson, Frederic; Causse, Romain; Chenuil, Anne; Couloux, Arnaud; Coutanceau, Jean-pierre; Cruaud, Corinne; D'Udekem D'Acoz, Cedric; De Ridder, Chantal; Denys, Gael; Dettai, Agnes; Duhamel, Guy; Eleaume, Marc; Feral, Jean-pierre; Gallut, Cyril; Havermans, Charlotte; Held, Christoph; Hemery, Lenaig; Lautredou, Anne-claire; Martin, Patrick; Ozouf-costaz, Catherine; Pierrat, Benjamin; Pruvost, Patrice; Puillandre, Nicolas; Samadi, Sarah; Saucede, Thomas; Schubart, Christoph; David, Bruno. |
| There has been a significant body of literature on species flock definition but not so much about practical means to appraise them. We here apply the five criteria of Eastman and McCune for detecting species flocks in four taxonomic components of the benthic fauna of the Antarctic shelf: teleost fishes, crinoids (feather stars), echinoids (sea urchins) and crustacean arthropods. Practical limitations led us to prioritize the three historical criteria (endemicity, monophyly, species richness) over the two ecological ones (ecological diversity and habitat dominance). We propose a new protocol which includes an iterative fine-tuning of the monophyly and endemicity criteria in order to discover unsuspected flocks. As a result nine "full" species flocks... |
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| Ano: 2013 |
URL: https://archimer.ifremer.fr/doc/00296/40754/39754.pdf |
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| Stöhr, Sabine; Weber, Alexandra; Boissin, Emilie; Chenuil, Anne. |
| The conspicuous Mediterranean brittle star Ophioderma longicauda (Bruzelius, 1805) has been discovered to represent a cryptic species complex, consisting of six nuclear clusters with contrasting reproductive modes (broadcast spawners and brooders). Here, O. longicauda is re-described. It is distinguished by a dark reddish-brown colouration both dorsally and on the ventral disc, and multiple tumid dorsal arm plates. One eastern Mediterranean brooding cluster is described as O. zibrowii sp. nov., characterized by a dark olive-green colour both dorsally and on the ventral disc, and single dorsal arm plates. Another brooder is described from Tunisia as O. hybrida sp. nov., with a highly variable morphology that reflects its origin by hybridization of... |
| Tipo: Text |
Palavras-chave: Brittle stars; New species; Morphology; Mediterranean Sea; West Africa. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00610/72236/71039.pdf |
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| Rossi, Vincent; Lo, Madiop; Legrand, Terence; Ser-giacomi, Enrico; De Jode, Aurélien; Thierry De Ville D’avray, Laure; Pairaud, Ivane; Faure, Vincent; Fraysse, Marion; Pinazo, Christel; Chenuil, Anne. |
| Habitat connectivity is central to several key evolutionary and ecological processes, having implications for the spatial structuring of marine populations. For benthic species that have no or little mobility as adults, connectivity is evaluated by analyzing the dispersal of propagules across the seascape. We investigate fine-scale connectivity of coralligenous habitats in Marseille Bay (located in the north-western Mediterranean) sea using high-resolution cartography and a particle-tracking model ran over a range of parameters derived from the biological traits of potential target species. We present annual and seasonal means of various connectivity diagnostics measuring the retention and exchange of propagules among coralligenous patches. A synthetic... |
| Tipo: Text |
Palavras-chave: Habitat connectivity; Larval dispersal; Coralligenous assemblages; Benthic organisms; Oceanic circulation; Lagrangian modeling; Population genetics; Community composition. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00680/79225/81737.pdf |
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| Pante, Eric; Puillandre, Nicolas; Viricel, Amélia; Arnaud-haond, Sophie; Aurelle, Didier; Castelin, Magalie; Chenuil, Anne; Destombe, Christophe; Forcioli, Didier; Valero, Myriam; Viard, Frederique; Samadi, Sarah. |
| Connectivity among populations determines the dynamics and evolution of populations, and its assessment is essential in ecology in general and in conservation biology in particular. The robust basis of any ecological study is the accurate delimitation of evolutionary units, such as populations, metapopulations and species. Yet a disconnect still persists between the work of taxonomists describing species as working hypotheses and the use of species delimitation by molecular ecologists interested in describing patterns of gene flow. This problem is particularly acute in the marine environment where the inventory of biodiversity is relatively delayed, while for the past two decades, molecular studies have shown a high prevalence of cryptic species. In this... |
| Tipo: Text |
Palavras-chave: Connectivity; Marine organisms; Molecular systematics; Taxonomy. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00248/35952/35301.pdf |
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